Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911444.1_cds_XP_016461419.1_54743
CDS Infomation

[gene=LOC107784755] [db_xref=GeneID:107784755] [protein=ubiquitin-like-specific protease ESD4] [protein_id=XP_016461419.1] [location=complement(join(28617..28679,30236..30308,30495..30598,30840..30959,31040..31132,32062..32160,32397..32490,32585..32664,32749..33534))] [gbkey=CDS]
Sequence

ATGGTGGCGTTAACGTTCAATAGGAAGCGAGGTAACGATTTCTTCTCTTCAAATTACAAA
ACCCAATTTTCAAGTCCTTCCAATTTCGACCACATTTCAAAAAAACCCAAACTTTCTATA
TATCAAACCCTAAATCCACCAAAATCAACTGTTCAAAGGTTTTTCATGTACCCGGATCCA
ATTAACCCGATTCGAAGACAAGTTCATGCTCCTTGCAGGCATTCAAGATTTGGGTCTAAG
GGTATTTCAGCAAATTCAGCTCCTGAAACGGGTAATTTTGTATCAAGAGTGTACGATGAA
GCTAAGAAAAGTGCTTTTTATAGTTTAAGGTGTTTGAAAAAAGTTAAGGAAGTGATATTT
ATTGATGATGATGATGCTAAAAAGGGTGATTTAGAAGCTGGGGTTTGTAAACAAAGTGAT
GTTTTTTGTAATTTGGAAGGTGGGGTTTGTGAAAAAAGTGATTTTTTAGGCCAGAAGTGG
AAGCAGACTAATGGGCCTCTGGAAATTTTGAATGGTGTTGATGGTCACGATTCGTTGGTA
GTAACGACGGGTTTGGATGATGGAAATTTGAAGGAAGAGAGTGTAGGGAAGATGTTAGAC
ACACTAGCGTTGAACCCCACGTCTGATTCTGCTTTCTATGTCCCTTTGTATAAGAAATTG
CTTGGTTCAGTGGGGAAAATAAATGATAAGTTGAAAAGACTGCAGTTTCAGATTGGATAT
AATGAGAAGTGTCTCGAAACGTATAGTTTGTTGCGGCCTCAGAAGAAAGAAGAACAGGTT
AAAGAGGATGTGATTTCAGAACCATTTGTCCCTCTCACTGAGGAGGAAGAGGTTGAGGTA
TCGCGTGCTTTATCCAAATCCAATCGAAGACGGGTTTTGGTGACCCATCAAAACTCCAAT
ATTGATATTACTGGAGAAATATTGCAATGTTTAAGACCTAGGGAATGGTTGAATGATGAG
GTTATCAATGTGTATCTTGAACTGTTAAAAGAGAGAGAGAAAAGGGACCCCCAAAAGTTC
TTGAAATGTCATTTCTTTAACACATTCTTTTACAAGAAGTTGATAGGTGGCAGGGGAGGC
TATAACTATCAATCTGTGAGAAGATGGACATCCCAAAGAAAGCTGGATTACTGCCTACTC
GAATGCGATAAAATCTTTGTCCCTATCCACAAAGAAATACATTGGTGTTTAGCTGTTATC
AATAAGAAGGACAAAAAGTTCCAATATCTTGATTCGCTCAGAGGAAGGGATACTCAAGTG
TTGAAAGTGCTGGCTAGGTACTTTGTTGATGAGGTGAAGGACAAAAATGGGAAAGACATT
GATGTTAGTTCATGGAAGCAAGAGTTTGTCGAGGACCTTCCAGAGCAAAAGAATGGGTTT
GACTGCGGTGTGTTCATGATAAAAAATGCTGATTTCTACAGCAGAGATATAGGCCTCTGT
TTTAATCAGGAAGACATGCCGTATTTTAGGTTGAGGACTGCGAAGGAGATCTTGAGGTTG
AAAGCAGATTAA

Peptide Sequence

PEP ID

XP_016461419.1
PEP Infomation

PREDICTED: ubiquitin-like-specific protease ESD4 [Nicotiana tabacum]
Sequence

MVALTFNRKRGNDFFSSNYKTQFSSPSNFDHISKKPKLSIYQTLNPPKSTVQRFFMYPDP
INPIRRQVHAPCRHSRFGSKGISANSAPETGNFVSRVYDEAKKSAFYSLRCLKKVKEVIF
IDDDDAKKGDLEAGVCKQSDVFCNLEGGVCEKSDFLGQKWKQTNGPLEILNGVDGHDSLV
VTTGLDDGNLKEESVGKMLDTLALNPTSDSAFYVPLYKKLLGSVGKINDKLKRLQFQIGY
NEKCLETYSLLRPQKKEEQVKEDVISEPFVPLTEEEEVEVSRALSKSNRRRVLVTHQNSN
IDITGEILQCLRPREWLNDEVINVYLELLKEREKRDPQKFLKCHFFNTFFYKKLIGGRGG
YNYQSVRRWTSQRKLDYCLLECDKIFVPIHKEIHWCLAVINKKDKKFQYLDSLRGRDTQV
LKVLARYFVDEVKDKNGKDIDVSSWKQEFVEDLPEQKNGFDCGVFMIKNADFYSRDIGLC
FNQEDMPYFRLRTAKEILRLKAD

Transcript Sequence

Gene sequence data has not been registered.